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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015799259.1_cds_XP_016464261.1_5693
CDS Infomation

[gene=LOC107787231] [db_xref=GeneID:107787231] [protein=calcium-dependent protein kinase 17-like] [protein_id=XP_016464261.1] [location=complement(join(78184..78471,78749..78864,79360..79512,79974..80117,80562..81273))] [gbkey=CDS]
Sequence

ATGGGGAATTGTTGCTCTAGTGGGGAAGAACCTAATGAAATTACAAACAATGAAAATGGA
CAAACCAATAACCCTAAAAATGGAGAAAATTCTTCATCTACACATAATCTTGATTCCACA
ACACCAACAAAAACAACCCCTCCTCCTCAAACAACAACAACATCCCCTAGCCCTTCATCA
AAACCTTCAAAACCATCACCAATAGGGCCAGTTTTAGGCAGACCAATGGAAGATGTTAGA
ACAACATACACTATAGGAAAAGAACTTGGTAGGGGACAATTTGGTGTAACACATTTGTGT
ACACACAAACAAACAGGAGAACAATTTGCATGCAAAACAATAGCAAAAAGAAAACTAGTG
AACAAAGAAGACATTGAAGATGTTAGAAGAGAAGTACAAATAATGCACCATTTGACAGGA
CAACCAAATATTGTGGAATTAAAAGGAGCTTATGAGGACAAACATTCTGTGCATTTGGTT
ATGGAGTTGTGTGCTGGAGGTGAACTTTTCGATCGAATTATCGCTAAGGGGCATTACACA
GAACGTGCAGCAGCTTCATTGTTAAGAACAATTGTGCAAATTGTGCATACTTGCCATTCT
ATGGGAGTTATTCATAGAGATCTTAAGCCTGAGAATTTTCTACTTCTTAATAAGGATGAG
AATGCACCTCTTAAAGCTACAGATTTTGGCCTTTCAGTATTCTACAAGCAAGGAGATGTA
TTTAAAGACATTGTGGGTAGTGCATATTACATTGCACCTGAAGTCTTGAAAAGAAGATAT
GGACCAGAAGTTGATATATGGAGTATTGGGGTTATGTTATACATTCTTCTCTGTGGAGTT
CCTCCTTTCTGGGCAGAAAATGAAAATGGAATATTCAATGCAATATTGCGGGGACATATT
GATTTTTCAAGTGATCCATGGCCTTCAATTTCCGGTGGAGCCAAAGACCTTGTCAGGAAG
ATGTTGACAATAGATCCCAAGCAGAGATTAACAGCTATGCAAGTCCTCAATCATTCATGG
ATCAAGGAGGATGGAGAAGCACCAGATACACCACTGGACAATGCTGTATTACATAGGCTC
AAACAATTCAGAGCTATGAACAAGTTTAAGAAAGTTGCTCTTCGGGTTATTGCAGGGTGC
CTTTCAGAGGAAGAAATTATGGGATTAAAGCAAATGTTCAAAAACATGGATGCTGATAAC
AGTGGATCAATTACAATTGAGGAATTAAAGCAAGGATTAGCCAAACAAGGGACTAAACTA
TCAGATTATGAGATTAAACAGTTAATGGAAGCTGTAAGTTCTACAAGTTCTTCTTTTTTT
TTAAATAATCGTGGTGTCCAGTTCAGTTTGCGTGTACCTCGACTAATTTCACGGAACATC
TGCTACCTCCCACCAACAGTTCTACAAACTTAA

Peptide Sequence

PEP ID

XP_016464261.1
PEP Infomation

PREDICTED: calcium-dependent protein kinase 17-like [Nicotiana tabacum]
Sequence

MGNCCSSGEEPNEITNNENGQTNNPKNGENSSSTHNLDSTTPTKTTPPPQTTTTSPSPSS
KPSKPSPIGPVLGRPMEDVRTTYTIGKELGRGQFGVTHLCTHKQTGEQFACKTIAKRKLV
NKEDIEDVRREVQIMHHLTGQPNIVELKGAYEDKHSVHLVMELCAGGELFDRIIAKGHYT
ERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDENAPLKATDFGLSVFYKQGDV
FKDIVGSAYYIAPEVLKRRYGPEVDIWSIGVMLYILLCGVPPFWAENENGIFNAILRGHI
DFSSDPWPSISGGAKDLVRKMLTIDPKQRLTAMQVLNHSWIKEDGEAPDTPLDNAVLHRL
KQFRAMNKFKKVALRVIAGCLSEEEIMGLKQMFKNMDADNSGSITIEELKQGLAKQGTKL
SDYEIKQLMEAVSSTSSSFFLNNRGVQFSLRVPRLISRNICYLPPTVLQT

Transcript Sequence

Gene sequence data has not been registered.